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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815515.1_cds_XP_016498363.1_12400
CDS Infomation

[gene=LOC107817101] [db_xref=GeneID:107817101] [protein=protein ECERIFERUM 1-like isoform X3] [protein_id=XP_016498363.1] [location=join(17841..17900,18685..18911,19858..20090,20536..20755,22039..22414,22495..22602,22853..23056,23130..23228,23453..23611,23725..23895)] [gbkey=CDS]
Sequence

ATGGCTACTAAACCTGGCATTCTCACAGAGTGGCCATGGGCACGCCTTGGGAACTTCAAG
TACTTGCTTTTGGCACCATTTGTGGGTCATAGCATATACTCTTTCATCATGAGCAAAGAT
GAAAGCCAAAGGGACATCTCATACATATTCATACTTCCATATCTACTCTCGAGAATGATT
CACAATCAGATATGGACATCTCTATCTCGCTACAGGACTGCTAAGGGTAATAATCGAATT
CTAGACAAGAGCATTGAATTTGATCAAGTTGATCGAGAAACCAACTGGGATGATCAGATC
ATACTTAATGGGGTGGTATTCTACATTGCGTACCTGAAGTTCCAACAGACACATCACTTG
CCTTTGTGGAGAACTGATGGGATCATAATAACTGCCTTGATGCATATCGGTCCAGTGGAG
TTTCTCTATTACTGGCTTCACAGAGCTTTTCACCACCATTTTCTCTACTCTCGTTATCAT
TCCCATCATCACTCCTCCATTGTTACTGAGCCCATCACCTCTGTCATTCATCCGTTTGCT
GAGATCGTAGCATATTTGACGCTCTTTCTTATACCAATGACCACAACACTTTTCACTGGA
ACTGCTTCTATAGCTTCACTTGGTGCTTACACCACCTATATTGATTTCATGAACTACATG
GGGCATTGCAACTTTGAGCTCATTCCTAAGTGGATGTTCTCTATGTTTCCCCCTCTCAAG
TACTTGATGTATACGCCCACGTTCCACTCACTACATCACACTCAATTTAGAACAAATTAT
TCGCTTTTCGTGCCAATGTATGACCATCTGTATGGTACAGTGGACAAGTCGTTAGATACA
TTGTATGAAAAGTCACTTGAGAGGAAAGCTGAATTACCTGACGTTGTGCACCTAACACAT
CTAACAACCCCAGAATCTATCTACCATCTCAGACTAGGGTTTGCATCCTTGGCCTCGAGG
CCTCACGCTTCCAAGTGGTATATCTTGTTAATGTGGCCTGTTACGCTATGGTCATTTTTT
ATTACTTGGATTTATGGTCAAACATTTGTTGTCGAGAGAAATTTATTCAGGAATATTAAA
CTACAAACTTGGGCTATCCTAAAGTACAGGAAACAATACTTTATGCAAGGGCAAAGAGAT
ACTATTAACAATTTGATTGAGGAAGCCATCATGGAAGCTGATCAGAAAGGCATAAAAGTT
TTGAGCCTTGGACTCCTAAATCAGCAGGAAGAGCAGCTGAACAATAATGGTGAACTTTAC
ATAAGGAAAAATCCTCAGTTGAAAGTGAAGGTGGTTGATGGAAGTAGTCTAGTTGTTGCT
GTGGTCCTAAACTCCATTCCTAAAGGAACTTCCCAAGTGGTCCTTAGAGGTCGTTTGTCC
AAAGTTTCTTGCTCCATCGCCCTTGTATTGTGCCAAAGAGGAATTCAGGTTATCATGTTA
GATGAAGAAGAGTACAAGAGACTTAAAGCAAGGCTTACCCCTGAGGCTGCAACTAATTTG
GTCCAGTCAAAGACCTATTTACCAAAGATATGGCTAGTAGATGATGGATTGAGCGAAGAC
GAACAACTGAAAGCGCCAAAAGGAACATTATATATTCCTTTTTCACAATTTCCACCAAGA
AAAGTTCGCAAGAATTGCTTCTACTTCAACACACCAGCCATGCTTACTCCAAAACATCTT
GAAAATAATTGGCTGCCAAGAAGAGTGATGAGTGCCTGGAGAATAGCTGGAATTTTGCAT
GCATTGGAAGGTTGGAATGAGCATGAATGTGGTGACATGATGCTTGATATTGAGAAAGCG
TGGAAAGCTAGTCTTGATCATGGTTTTCGCCCATTAAAAATGACTTCTGCTGCTTAA

Peptide Sequence

PEP ID

XP_016498363.1
PEP Infomation

PREDICTED: protein ECERIFERUM 1-like isoform X3 [Nicotiana tabacum]
Sequence

MATKPGILTEWPWARLGNFKYLLLAPFVGHSIYSFIMSKDESQRDISYIFILPYLLSRMI
HNQIWTSLSRYRTAKGNNRILDKSIEFDQVDRETNWDDQIILNGVVFYIAYLKFQQTHHL
PLWRTDGIIITALMHIGPVEFLYYWLHRAFHHHFLYSRYHSHHHSSIVTEPITSVIHPFA
EIVAYLTLFLIPMTTTLFTGTASIASLGAYTTYIDFMNYMGHCNFELIPKWMFSMFPPLK
YLMYTPTFHSLHHTQFRTNYSLFVPMYDHLYGTVDKSLDTLYEKSLERKAELPDVVHLTH
LTTPESIYHLRLGFASLASRPHASKWYILLMWPVTLWSFFITWIYGQTFVVERNLFRNIK
LQTWAILKYRKQYFMQGQRDTINNLIEEAIMEADQKGIKVLSLGLLNQQEEQLNNNGELY
IRKNPQLKVKVVDGSSLVVAVVLNSIPKGTSQVVLRGRLSKVSCSIALVLCQRGIQVIML
DEEEYKRLKARLTPEAATNLVQSKTYLPKIWLVDDGLSEDEQLKAPKGTLYIPFSQFPPR
KVRKNCFYFNTPAMLTPKHLENNWLPRRVMSAWRIAGILHALEGWNEHECGDMMLDIEKA
WKASLDHGFRPLKMTSAA

Transcript Sequence

Gene sequence data has not been registered.